Gut Barrier and Immune Resilience
Protocol development in integrative medicine is not typically a simple process. Individuals require individualized care, and what works for one patient may not work for another.
To establish these protocols, we first developed a Rating Scale that could be used to discern the rigor of evidence supporting a specific nutrient’s therapeutic effect.
The following protocols were developed using only A through D-quality evidence.
What Is Healthspan?
Healthspan describes the period of life spent in good health, free from the chronic diseases and disabilities of aging. It focuses on the period of good health and functionality in which individuals remain healthy, active, independent, and productive both mentally and physically. Ultimately, the goal of improving healthspan is remaining healthier for longer, ideally delaying the onset of chronic disease. (Masfiah 2025)
Why the Gut Barrier and Immune Resilience Matters
A healthy gut barrier is essential for maintaining immune balance and reducing the risk of chronic disease because it serves as a critical interface between the external environment and the internal immune system. The intestinal barrier is composed of the microbiota, mucus layer, epithelial cells with tight junctions, and immune components that collectively regulate the selective passage of nutrients while preventing pathogens, toxins, and microbial products from entering systemic circulation. When this barrier becomes compromised, microbial components such as lipopolysaccharide can translocate into the bloodstream, triggering systemic immune activation and contributing to chronic low-grade inflammation. This persistent inflammatory signaling has been linked to the pathogenesis of numerous chronic diseases, including metabolic disorders, liver disease, autoimmune conditions, and cardiovascular disease. (Di Vincenzo 2024)
Since immune function and inflammation are central drivers of aging-related diseases, maintaining gut barrier integrity and immune resiliency plays a key role in extending healthspan. Healthspan refers to the portion of life spent free from chronic disease and functional decline, and preventing chronic systemic inflammation is a major determinant of achieving this goal. By preserving barrier integrity and regulating immune responses, the gut helps maintain metabolic and immune homeostasis, reducing the risk of inflammation-driven diseases that commonly emerge with aging. Therefore, strategies that support gut barrier function and immune resilience may help delay the onset of chronic disease and support longer periods of healthy, functional living. (Martel 2022)
Purpose of the Clinical Guide
The Gut Barrier and Immune Resilience clinical guide was designed to:
- Simplify decision-making using standardized, evidence-rated nutrient and lifestyle interventions.
- Integrate laboratory and biomarker data to identify modifiable contributors to gastrointestinal and immune health.
- Serve as the foundation for individualized care plans aimed at supporting gastrointestinal and immune health through the lifespan.
Essential Labs
Ranges for the following markers will vary based on laboratory.
Fecal Calprotectin
Fecal calprotectin is the most extensively validated and widely used fecal biomarker for gastrointestinal (GI) inflammation. It is a calcium- and zinc-binding protein found in neutrophils. Calprotectin in stool is a consequence of neutrophil migration due to inflammation in the GI tract. It is a sensitive marker for distinguishing inflammatory bowel disease (IBD) from functional GI diseases. A 2019 systematic review and meta-analysis of 18 trials found that fecal calprotectin has an 88% (95% CI, 80–93%) sensitivity and 72% (95% CI, 59–82%) specificity for distinguishing organic gastrointestinal diseases, including IBD, from functional GI disorders. (An 2019)(Pathirana 2018)
Fecal Secretory Immunoglobulin A (SIgA)
Secretory IgA is one form of IgA produced by plasma cells in mucosal tissues of the GI, genitourinary, and respiratory tracts as well as in saliva, tears, and breast milk. Its secretory component allows it to remain stable in harsh environments. As the primary antibody protecting mucosal surfaces, it is abundant in the mucosal layer of the GI tract, preventing pathogens and toxins from binding to epithelial cell receptors. This marker is considered a direct assessment of gastrointestinal mucosal immune function and indicates active intestinal inflammation when elevated. Fecal sIgA correlates with disease activity in both Crohn’s disease (CD) and ulcerative colitis (UC). Newer research demonstrates that it shapes the microbiome through subclass-specific coating patterns and metabolite-mediated bidirectional communication. It should be noted that fecal sIgA is influenced by many factors and should not be interpreted in isolation as a marker of inflammation. (León 2022)(Lin 2018)(Vaquero 2024)
Low sIgA is associated with:
- Chronic GI dysbiosis
- Chronic stress
- Immunocompromised state
- Protein malnutrition
- Systemic IgA deficiency
- Chronic illness – celiac disease, IBD
High sIgA is associated with:
- Chronic gastrointestinal dysbiosis
- Acute infection
- Acute stress
- Food sensitivities
- Intestinal permeability
- GI inflammation – irritable bowel syndrome (IBS), IBD (Pietrzak 2020)(Campos-Rodríguez 2013)
Microbiome Diversity
Microbiome diversity is often reported as alpha diversity, specifically Shannon’s Index (the richness of the bacterial community) and Simpson’s Index (the evenness). While increased microbial diversity has been shown to correlate with less systemic inflammation, cardiovascular risk, and mortality risk, alpha diversity alone is not a consistent marker of disease. Not all diseases are associated with reduced diversity. A 2018 observational study of >600 women found that higher microbiome diversity (as measured by the Shannon and Simpson indices) was significantly associated with lower arterial stiffness (as measured by pulse wave velocity). A 2026 prospective cohort study of >2,000 adults with hypertension found that individuals with higher oral microbiome diversity had significantly lower mortality risk (Simpson Diversity – HR 0.38, 95% CI 0.20–0.75, p<0.01; Shannon Diversity – HR 0.47, 95% CI 0.25–0.88, p<0.05). A 2025 observational study of 112 subjects hospitalized with severe COVID concluded that lower gut diversity was associated with more severe disease. The Shannon Diversity Index was significantly reduced in critically ill patients compared to those with mild disease (p<0.05). (Gupta 2020)(Menni 2018)(Zhou 2026)(Scalzo 2025)
Microbiome Testing
The human gut microbiota is composed of approximately 1,000 bacterial species, the majority of which belong to six major phyla: Firmicutes, Bacteroidetes, Actinobacteria, Proteobacteria, Fusobacteria, and Verrucomicrobia. Among these, Firmicutes and Bacteroidetes together account for roughly 90% of the total bacterial population. These phyla play critical roles in maintaining intestinal barrier function, supporting immune system development, producing short-chain fatty acids (SCFAs), and metabolizing dietary compounds. Disruptions in the balance of these microbial communities have been linked to conditions such as IBD, metabolic disorders, and immune dysregulation. (Patloka 2024)(Sędzikowska 2021)
Pancreatic Elastase 1
This is a proteolytic enzyme secreted by the pancreas that serves as a key biomarker for exocrine pancreatic function. It is a reliable stool marker because it remains stable throughout the GI tract. It reflects endogenous pancreatic function and is not affected by enzyme replacement. Severe exocrine pancreatic insufficiency (EPI) is diagnosed by pancreatic elastase 1 <100mcg/g and can be directly caused by chronic pancreatitis, cystic fibrosis, pancreatic cancer, autoimmune pancreatitis, and gallstones. Other conditions associated with EPI include celiac disease, IBD, diabetes, small intestinal bacterial overgrowth (SIBO), Zollinger-Ellison syndrome, excessive alcohol consumption, obesity, and smoking.
SCFAs
SCFAs are organic acids with carbon chains less than six carbons. They regulate the mucosal layer of the GI tract, prevent intestinal permeability, contribute to mucus secretions, promote the production of antimicrobial factors, and influence absorption of water, electrolytes, and nutrients in the colon. They foster an anaerobic, acidic environment to inhibit the growth of pathogenic bacteria and yeast and encourage a balanced immune response through anti-inflammatory and antimicrobial mechanisms. Acetate, propionate, and butyrate make up 95% of the total SCFA level in the GI tract, with acetate being the most abundant (60%). A more diverse diet positively influences SCFA levels. (Fusco 2023)
Reference ranges for SCFA levels will vary based on laboratory. Generally, elevated SCFA levels are associated with SIBO, while low SCFA levels are associated with the following:
- Diarrhea
- Constipation
- Chronic antibiotic use
- Lower fiber intake
- Dysbiosis
- Chronic diseases such as type 2 diabetes, obesity, chronic kidney disease, hypertension, IBD, colorectal cancer, metabolic dysfunction-associated steatotic liver disease (MASLD, previously called non-alcoholic fatty liver disease, or NAFLD), respiratory diseases, neurological disorders
Ingredients
Probiotics
Dosing:
- Lactobacillus plantarum: A minimum of 1 billion CFU daily for 4–8 weeks
- Lactobacillus rhamnosus GG: 6 billion CFU daily for 8 weeks
- Bifidobacterium longum 35624: 1 × 10⁸ CFU daily for 4 weeks
Supporting evidence:
- A 2019 randomized controlled trial (RCT) of 21 HIV-infected children 2–18 years who took Lactobacillus plantarum IS-10506 2.86 × 1010 CFU/day for 6 days showed a significant reduction in blood lipopolysaccharide (LPS) (p=0.001). (Athiyyah 2019)
- In a 2012 RCT of >200 patients with IBS, 10¹⁰ CFU Lactobacillus plantarum 299v daily for 4 weeks significantly reduced pain severity in the study population (0.68 + 0.53 vs. 0.92 + 0.57, P < 0.05) and daily pain frequency (1.01 + 0.77 vs. 1.71 + 0.93, P < 0.05) compared to placebo. (Ducrotté 2012)
- In a 2023 RCT of 307 adult 18–70 years with diarrhea-predominant IBS (IBS-D), the change in IBS-severity scoring system total significantly decreased in participants receiving both L. plantarum Lpla33 at 1 × 109 (-128.45 ± 83.30; P < 0.001) and 1 × 1010 (-156.77 ± 99.06; P < 0.001) for 8 weeks compared to placebo. (Martoni 2023)
- In a 2026 systematic review with meta-analysis, Lactobacillus rhamnosus GG significantly reduced severity of abdominal pain in patients with IBS compared to placebo. Benefits were most consistent with doses around 6×109 CFU/day. Higher doses of 20–40 billion CFU/day did not consistently show improvements. Positive effects were mainly observed with at least 8 weeks of supplementation compared with 4–6 weeks. (Maslennikov 2026)
- In a 2024 systematic review of Bifidobacterium longum 35624 in patients with IBS, 1 × 10⁸ CFU/day significantly reduced abdominal pain at 4 weeks in the study population, while 10⁶ CFU/day and 10¹⁰ CFU/day were less consistently superior to placebo. (Andreev 2024)
- Bifidobacterium and Lactobacillus strains have been consistently shown to improve markers of gut barrier function and systemic inflammation, including serum zonulin, LPS, c-reactive protein (CRP), tumor necrosis factor alpha (TNF-α), and interleukin 6 (IL-6). Specific strains demonstrate targeted benefits: Bifidobacterium lactis and Bifidobacterium breve enhance fecal sIgA levels and promote tight junction protein synthesis, while Bifidobacterium infantis reduces inflammatory cytokines and modulates T regulatory (Treg) cell activity. Among Lactobacillus strains, Lactobacillus plantarum has been shown to strengthen the mucosal barrier and reduce inflammatory cytokines at doses of 10–20 billion CFU. Lactobacillus rhamnosus GG (LGG) effectively decreases intestinal permeability, and Lactobacillus paracasei increases sIgA, reduces inflammatory cytokines, and enhances cellular immunity. Collectively, these strains support both local gut health and systemic immune regulation. (Zheng 2023)(Francavilla 2010)(Poon 2020)
Butyrate
Dosing: 300–800 mg daily
Supporting evidence:
- A 2025 multi-center, double-blind, randomized, placebo-controlled trial evaluated 98 adults with active mild to moderate UC. Participants received microencapsulated sodium butyrate at a dose of 300 mg twice daily for 8 weeks as an add-on therapy. The treatment group demonstrated significant clinical benefits, with 51% achieving clinical improvement defined as a ≥3-point reduction in Total Mayo Score compared to placebo (P = 0.005). Additionally, in the study population, 31.4% reached clinical remission (P = 0.004), and 42.2% achieved biochemical remission, defined as fecal calprotectin ≤250 µg/g (P = 0.009). Notably, there was a strong correlation between fecal butyric acid levels and clinical improvement, with correlation coefficients ranging from rho = 0.80–0.87. (Karłowicz 2025)
- A 2024 randomized, placebo-controlled trial evaluated 36 patients with active UC who received sodium butyrate at a dose of 600 mg per day for 12 weeks. The intervention resulted in significant reductions in fecal calprotectin and hs-CRP (both P < 0.001), along with marked improvements in quality of life (P < 0.001), highlighting its potential role in reducing inflammation and improving patient-reported outcomes in this population. (Firoozi 2024)
- An observational study in UC patients in remission demonstrated notable benefits of butyrate as an add-on therapy. Therapeutic success was achieved in 83% of patients in this study receiving butyrate in addition to standard care compared to 48% with mesalamine alone (P = 0.022). Even greater efficacy was observed with a combination approach, as 95% of patients in this study receiving butyrate alongside fructooligosaccharides (FOS) and probiotics achieved therapeutic success versus 57% with 5-aminosalicylic acid (5-ASA) alone (P = 0.009). Over a 12-month period, these interventions were also associated with a significant reduction in fecal calprotectin, suggesting sustained anti-inflammatory effects. (Vernero 2020)
Glutamine
Dosing:
- 30 g daily to reduce intestinal permeability (Abbasi 2024)
- 5 g three times per day for post-infectious IBS-D (Zhu 2022)
Supporting evidence:
- In a 2024 systematic review and meta-analysis of 10 studies with 352 participants, the sub-group analysis showed a significant reduction in intestinal permeability with doses over 30g/day (WMD: −0.01, 95% CI −0.10, −0.08). (Abbasi 2024)
- In a small clinical trial with 10 healthy men, glutamine consumed 2 hours prior to exercise significantly reduced intestinal permeability in a dose-dependent way. The dose 0.9 g/kg fat-free mass saw the most benefit. For a 70-kg individual with approximately 60 kg of fat-free mass, the glutamine dose would be 54 grams. (Pugh 2017) These results were confirmed by a second similar study. (Zuhl 2014)
Fructooligosaccharides (FOS)
Dosing: 2.5–15 g daily
Supporting evidence:
- A 2022 systematic review and meta-analysis evaluated 8 RCTs involving over 300 participants to assess the effects of FOS on the gut microbiota. Across the included studies, FOS doses ranged from approximately 2.5 g–15 g per day, with intervention durations spanning 7–56 days. Overall, FOS supplementation significantly increased Bifidobacterium abundance. Subgroup analyses demonstrated that longer intervention durations greater than 4 weeks resulted in larger increases, while higher doses above 5 g per day produced the most pronounced effects. (Dou 2022)
- A 2019 RCT evaluated 80 healthy adults aged 18–55 years who received daily FOS supplementation at doses of 2.5, 5, and 10 grams per day over a seven-month period. The study found that FOS significantly increased Bifidobacterium abundance at all doses. Lactobacillus levels also increased in a dose-dependent manner, with statistically significant changes observed at the 5 and 10 gram doses. Additionally, supplementation at 5 and 10 grams per day led to significant increases in butyrate-producing bacteria and improvements in alpha diversity, indicating enhanced overall gut microbial diversity at higher intake levels. (Tandon 2019)
Saccharomyces boulardii
Dosing: 250–500 mg twice daily, 5–10 × 10⁹ CFU
Supporting evidence:
- A 2017 double-blind, randomized, placebo-controlled trial in 44 HIV-treated patients found that supplementation with Saccharomyces boulardii (6.5 mg living yeasts per capsule, 2 capsules three times daily) for 12 weeks resulted in a significant reduction in plasma lipopolysaccharide-binding protein (LBP) (p = 0.019) and serum IL-6 (p = 0.037), along with microbiome shifts including lower concentrations of Clostridiaceae. (Villar-García 2017)
- A 2014 randomized, double-blind, placebo-controlled trial in 72 patients with IBS-D demonstrated that Saccharomyces boulardii at 750 mg per day for 6 weeks significantly reduced IL-8 and TNF-α, and improved mucosal immune markers, including reductions in lymphocyte and neutrophil infiltrates and intraepithelial lymphocytes. (Abbas 2014)
- A 2023 randomized, double-blind, placebo-controlled trial in 40 patients with multiple sclerosis showed that Saccharomyces boulardii at 50 mg daily (10¹⁰ CFU) for 4 months significantly reduced hs-CRP (p < 0.001), pain intensity (p = 0.004), and fatigue severity (p = 0.01), while significantly improving total antioxidant capacity (p = 0.004) and quality of life (p = 0.01). (Asghari 2023)
Zinc Carnosine
Dosing: 37.5 mg twice daily
Supporting evidence:
- In a 2006 randomized crossover trial of 10 healthy subjects, zinc carnosine at a dose of 37.5 mg twice daily combined with indomethacin 50 mg three times daily prevented increases in intestinal permeability, as measured by the lactulose:rhamnose ratio, whereas indomethacin alone increased permeability threefold. (Mahmood 2006)
- In a separate 2016 double-blind, placebo-controlled crossover study of 8 subjects, zinc carnosine at the same dose of 37.5 mg twice daily reduced gut permeability by 70% over 14 days based on the lactulose:rhamnose ratio, although larger confirmatory trials are needed. (Davison 2016)
- Mechanistically, zinc carnosine has been shown to increase occludin expression, upregulate heat shock proteins, and reduce apoptosis in heat-stressed intestinal cells. Clinically, it is also used as an anti-ulcer agent in Japan at a dose of 75 mg twice daily. (Matsukura 2000)
Lifestyle Recommendations
Nutrition
Risk Factors
Diet is a key modulator of the microbiome. Western dietary patterns high in ultra-processed products with sugar and fat and low in plant compounds increase the Firmicutes/Bacteroidetes (F/B) ratio. The western diet increases LPS and endotoxemia, while a Mediterranean diet rich in fiber and plants is associated with higher levels of Lactobacillus sp., Bifidobacterium sp., Prevotella sp., Akkermansia muciniphila, and Faecalibacterium prausnitzii, as well as less endotoxemia. (Ortega 2020) High-fat, high-protein, and low-fiber dietary patterns increase the F/B ratio. (Patloka 2024)
Only 5% of Americans meet the dietary fiber guidelines. The mean intake is 17 grams/day, while recommendations range from 25–38 grams daily. (Dahl 2015) A 2025 umbrella review of 17 million people concluded higher fiber intake reduces cardiovascular disease mortality, diverticular disease, colorectal cancer, and all-cause mortality. (Veronese 2025)
Interventions
Soluble Fermentable Fibers
The greatest risk reduction in all‑cause mortality, coronary heart disease, stroke, type 2 diabetes, and some cancers was seen when total dietary fiber intake increased up to about 25–29 grams/day. Soluble fermentable fibers undergo colonic fermentation to produce SCFAs such as butyrate, propionate, and acetate. These fibers serve as fuel for colonocytes, strengthen tight junctions, and modulate immune function. They also enhance gut barrier integrity by upregulating tight junction proteins, including occludin, claudins, and zonula occludens-1 (ZO‑1), as well as mucin-2, thereby reducing intestinal permeability and systemic endotoxemia. In addition, SCFAs exert broad immune-modulatory effects, regulating regulatory T cells, effector T cells, B cells, macrophages, and dendritic cells, promoting anti-inflammatory responses while suppressing nuclear factor-κB (NF‑κB) activation. (Reynolds 2019)
Mediterranean Diet
The LIBRE (Lifestyle Intervention Study in Women with Hereditary Breast and Ovarian Cancer) trial demonstrated that the Mediterranean diet reduces endotoxemia through fiber, polyphenol-rich foods, and olive oil. Comparatively, traditional diet patterns high in alcohol and processed meats were associated with higher LPS burden in a 2021 cross-sectional study of 698 older, French community-dwelling individuals. (Seethaler 2022)(André 2021)
The following guidelines summarize dietary recommendations to minimize intestinal permeability and improve gut barrier function:
- Minimize ultra-processed foods: These are the primary source of emulsifiers, artificial sweeteners, and microbial transglutaminase
- Reduce added sugars: Particularly fructose from sugar-sweetened beverages and HCFS
- Limit saturated fat: Replace with unsaturated fats (olive oil, nuts, fish)
- Moderate or eliminate alcohol: Even moderate intake impairs barrier function
- Read labels for emulsifiers: Avoid polysorbate 60/80, carrageenan, CMC
- Avoid artificial sweeteners: Particularly sucralose, aspartame, and saccharin
- Consider gluten reduction: Especially in patients with suspected barrier dysfunction or autoimmune conditions
Movement
Risk Factors
Sedentary behavior is associated with less favorable microbiome profiles, including lower diversity and SCFA-producing bacteria. (Pérez-Prieto 2024)
Interventions
Regular moderate-intensity exercise improves gut barrier function following a hormetic pattern. Acute, intense exercise transiently increases permeability, while chronic moderate exercise produces long-lasting barrier improvements through decreased LPS and increased beneficial bacterial species including Akkermansia, F. prausnitzii, and Bacteroidetes.
Stress
Risk Factors
Human clinical data demonstrates both acute and chronic psychological stress significantly increase intestinal permeability through corticotropin-releasing hormone (CRH) and mast cell activation. CRH activates intestinal mast cells, causing the release of mediators that disrupt tight junctions. Increased intestinal permeability allows bacterial translocation and LPS entry into circulation, further stimulating the hypothalamus-pituitary-adrenal (HPA) axis. (Marwaha 2025)(Yue 2017) A 2018 clinical trial with 23 healthy subjects found that acute psychological stress (public speaking) significantly increased small intestinal permeability measured by the lactulose-mannitol ratio. (Vanuytsel 2014) In a 2023 trial with 16 subjects, dichotomous listening stress (a form of acute stress) significantly increased paracellular permeability in rectal mucosa. (Gerdin 2023) A 2018 trial with 40 men found disruption to zonulin within one hour after psychosocial stress induction. (Linninge 2018)
Interventions
Participating in physical activity can improve stress resilience. During exercise, the body releases endorphins, which can improve mood. Adults should participate in at least 150 minutes (2.5 hours) of moderate-intensity exercise each week to reap the many health benefits exercise offers. (Childs 2014)(Anderson 2013)(The Department of Health & Human Services 2019)
Meditation, mindfulness, and breathing exercises can help minimize feelings of stress. Meditation has also been shown to lower high blood pressure, reduce resting heart rate, and decrease the body’s stress hormone, cortisol. Encourage patients to set aside a few minutes each day to focus on their breathing without external distractions or listen to a guided meditation exercise online. (Sharma 2015)
Disclaimer
The Fullscript Integrative Medical Advisory team has developed or collected these protocols from practitioners and supplier partners to help health care practitioners make decisions when building treatment plans. By adding this protocol to your Fullscript template library, you understand and accept that the recommendations in the protocol are for initial guidance and may not be appropriate for every patient.
- Abbas, ZAbbasi, F., Haghighat Lari, M. M., Khosravi, G. R., Mansouri, E., Payandeh, N., & Milajerdi, A. (2024). A systematic review and meta-analysis of clinical trials on the effects of glutamine supplementation on gut permeability in adults. Amino Acids, 56(1), 60. https://doi.org/10.1007/s00726-024-03420-7
- An, Y. K., Prince, D., Gardiner, F., Neeman, T., Linedale, E. C., Andrews, J. M., Connor, S., & Begun, J. (2019). Faecal calprotectin testing for identifying patients with organic gastrointestinal disease: Systematic review and meta-analysis. The Medical journal of Australia, 211(10), 461–467. https://doi.org/10.5694/mja2.50384
- Anderson, E., & Shivakumar, G. (2013). Effects of exercise and physical activity on anxiety. Frontiers in Psychiatry, 4, 27. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3632802/
- André, P., Pais de Barros, J. P., Mj Merle, B., Samieri, C., Helmer, C., Delcourt, C., & Féart, C. (2021). Mediterranean diet and prudent diet are both associated with low circulating esterified 3-hydroxy fatty acids, a proxy of LPS burden, among older adults. The American Journal of Clinical Nutrition, 114(3), 1080–1091. https://doi.org/10.1093/ajcn/nqab126
- Asghari, K. M., Dolatkhah, N., Ayromlou, H., Mirnasiri, F., Dadfar, T., & Hashemian, M. (2023). The effect of probiotic supplementation on the clinical and para-clinical findings of multiple sclerosis: A randomized clinical trial. Scientific Reports, 13(1), 18577. https://doi.org/10.1038/s41598-023-46047-6
- Asmuth, D. M., Ma, Z. M., Albanese, A., Sandler, N. G., Devaraj, S., Knight, T. H., Flynn, N. M., Yotter, T., Garcia, J. C., Tsuchida, E., Wu, T. T., Douek, D. C., & Miller, C. J. (2013). Oral serum-derived bovine immunoglobulin improves duodenal immune reconstitution and absorption function in patients with HIV enteropathy. AIDS (London, England), 27(14), 2207–2217. https://doi.org/10.1097/QAD.0b013e328362e54c
- Athiyyah, A. F., Brahmantya, H., Dwiastuti, S., Darma, A., Puspitasari, D., Husada, D., Ranuh, R., Endaryanto, A., Surono, I., & Sudarmo, S. M. (2019). Effect of Lactobacillus plantarum IS-10506 on blood lipopolysaccharide level and immune response in HIV-infected children. Iranian Journal of Microbiology, 11(2), 137–144.
- Bailey, M. A., & Holscher, H. D. (2018). Microbiome-mediated rffects of the Mediterranean diet on inflammation. Advances in Nutrition (Bethesda, Md.), 9(3), 193–206. https://doi.org/10.1093/advances/nmy013
- Camilleri M. (2025). Review: Human intestinal barrier-optimal measurement and effects of diet in the absence of overt inflammation or ulceration. Alimentary Pharmacology & Therapeutics, 62(2), 128–145. https://doi.org/10.1111/apt.70225
- Campos-Rodríguez, R., Godínez-Victoria, M., Abarca-Rojano, E., Pacheco-Yépez, J., Reyna-Garfias, H., Barbosa-Cabrera, R. E., & Drago-Serrano, M. E. (2013). Stress modulates intestinal secretory immunoglobulin A. Frontiers in Integrative Neuroscience, 7(86). https://doi.org/10.3389/fnint.2013.00086
- Carlson, J. L., Erickson, J. M., Hess, J. M., Gould, T. J., & Slavin, J. L. (2017). Prebiotic Dietary Fiber and Gut Health: Comparing the in Vitro Fermentations of Beta-Glucan, Inulin and Xylooligosaccharide. Nutrients, 9(12), 1361. https://doi.org/10.3390/nu9121361
- Catinean, A., Neag, M. A., Muntean, D. M., Bocsan, I. C., & Buzoianu, A. D. (2018). An overview on the interplay between nutraceuticals and gut microbiota. PeerJ, 6, e4465. https://doi.org/10.7717/peerj.4465
- Childs, E., & de Wit, H. (2014). Regular exercise is associated with emotional resilience to acute stress in healthy adults. Frontiers in Physiology, 5, 161. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013452/
- Cho, Y. E., Kim, D. K., Seo, W., Gao, B., Yoo, S. H., & Song, B. J. (2021). Fructose Promotes Leaky Gut, Endotoxemia, and Liver Fibrosis Through Ethanol-Inducible Cytochrome P450-2E1-Mediated Oxidative and Nitrative Stress. Hepatology (Baltimore, Md.), 73(6), 2180–2195. https://doi.org/10.1002/hep.30652
- Dahl, W. J., & Stewart, M. L. (2015). Position of the Academy of Nutrition and Dietetics: Health Implications of Dietary Fiber. Journal of the Academy of Nutrition and Dietetics, 115(11), 1861–1870. https://doi.org/10.1016/j.jand.2015.09.003
- Davison, G., Marchbank, T., March, D. S., Thatcher, R., & Playford, R. J. (2016). Zinc carnosine works with bovine colostrum in truncating heavy exercise-induced increase in gut permeability in healthy volunteers. The American journal of clinical nutrition, 104(2), 526–536. https://doi.org/10.3945/ajcn.116.134403
- De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., … Lionetti, P. (2010). Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proceedings of the National Academy of Sciences of the United States of America, 107(33), 14691–14696. https://doi.org/10.1073/pnas.1005963107
- de Souza, A. Z., Zambom, A. Z., Abboud, K. Y., Reis, S. K., Tannihão, F., Guadagnini, D., Saad, M. J., & Prada, P. O. (2015). Oral supplementation with L-glutamine alters gut microbiota of obese and overweight adults: A pilot study. Nutrition (Burbank, Los Angeles County, Calif.), 31(6), 884–889. https://doi.org/10.1016/j.nut.2015.01.004
- Del Bo’, C., Bernardi, S., Cherubini, A., Porrini, M., Gargari, G., Hidalgo-Liberona, N., González-Domínguez, R., Zamora-Ros, R., Peron, G., Marino, M., Gigliotti, L., Winterbone, M. S., Kirkup, B., Kroon, P. A., Andres-Lacueva, C., Guglielmetti, S., & Riso, P. (2021). A polyphenol-rich dietary pattern improves intestinal permeability, evaluated as serum zonulin levels, in older subjects: The MaPLE randomised controlled trial. Clinical nutrition (Edinburgh, Scotland), 40(5), 3006–3018. https://doi.org/10.1016/j.clnu.2020.12.014
- Depommier, C., Everard, A., Druart, C., Plovier, H., Van Hul, M., Vieira-Silva, S., Falony, G., Raes, J., Maiter, D., Delzenne, N. M., de Barsy, M., Loumaye, A., Hermans, M. P., Thissen, J. P., de Vos, W. M., & Cani, P. D. (2019). Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study. Nature medicine, 25(7), 1096–1103. https://doi.org/10.1038/s41591-019-0495-2
- Detzel, C. J., Horgan, A., Henderson, A. L., Petschow, B. W., Warner, C. D., Maas, K. J., & Weaver, E. M. (2015). Bovine immunoglobulin/protein isolate binds pro-inflammatory bacterial compounds and prevents immune activation in an intestinal co-culture model. PloS one, 10(4), e0120278. https://doi.org/10.1371/journal.pone.0120278
- Di Vincenzo, F., Del Gaudio, A., Petito, V., Lopetuso, L. R., & Scaldaferri, F. (2024). Gut microbiota, intestinal permeability, and systemic inflammation: a narrative review. Internal and emergency medicine, 19(2), 275–293. https://doi.org/10.1007/s11739-023-03374-w
- Dias, A. M., Correia, A., Pereira, M. S., Almeida, C. R., Alves, I., Pinto, V., Catarino, T. A., Mendes, N., Leander, M., Oliva-Teles, M. T., Maia, L., Delerue-Matos, C., Taniguchi, N., Lima, M., Pedroto, I., Marcos-Pinto, R., Lago, P., Reis, C. A., Vilanova, M., & Pinho, S. S. (2018). Metabolic control of T cell immune response through glycans in inflammatory bowel disease. Proceedings of the National Academy of Sciences of the United States of America, 115(20), E4651–E4660. https://doi.org/10.1073/pnas.1720409115
- Dou, Y., Yu, X., Luo, Y., Chen, B., Ma, D., & Zhu, J. (2022). Effect of Fructooligosaccharides Supplementation on the Gut Microbiota in Human: A Systematic Review and Meta-Analysis. Nutrients, 14(16), 3298. https://doi.org/10.3390/nu14163298
- Ducrotté, P., Sawant, P., & Jayanthi, V. (2012). Clinical trial: Lactobacillus plantarum 299v (DSM 9843) improves symptoms of irritable bowel syndrome. World journal of gastroenterology, 18(30), 4012–4018. https://doi.org/10.3748/wjg.v18.i30.4012
- Edelman, M., Wang, Q., Ahnen, R., & Slavin, J. (2024). The Dose Response Effects of Partially Hydrolyzed Guar Gum on Gut Microbiome of Healthy Adults. Applied Microbiology, 4(2), 720–730. https://doi.org/10.3390/applmicrobiol4020049
- Finegold, S. M., Li, Z., Summanen, P. H., Downes, J., Thames, G., Corbett, K., Dowd, S., Krak, M., & Heber, D. (2014). Xylooligosaccharide increases bifidobacteria but not lactobacilli in human gut microbiota. Food & function, 5(3), 436–445. https://doi.org/10.1039/c3fo60348b
- Firoozi, D., Masoumi, S. J., Mohammad-Kazem Hosseini Asl, S., Labbe, A., Razeghian-Jahromi, I., Fararouei, M., Lankarani, K. B., & Dara, M. (2024). Effects of short-chain fatty acid-butyrate supplementation on expression of circadian-clock genes, sleep quality, and inflammation in patients with active ulcerative colitis: a double-blind randomized controlled trial. Lipids in health and disease, 23(1), 216. https://doi.org/10.1186/s12944-024-02203-z
- Francavilla, R., Miniello, V., Magistà, A. M., De Canio, A., Bucci, N., Gagliardi, F., Lionetti, E., Castellaneta, S., Polimeno, L., Peccarisi, L., Indrio, F., & Cavallo, L. (2010). A randomized controlled trial of Lactobacillus GG in children with functional abdominal pain. Pediatrics, 126(6), e1445–e1452. https://doi.org/10.1542/peds.2010-0467
- Fuke, N., Nagata, N., Suganuma, H., & Ota, T. (2019). Regulation of Gut Microbiota and Metabolic Endotoxemia with Dietary Factors. Nutrients, 11(10), 2277. https://doi.org/10.3390/nu11102277
- Fusco, W., Lorenzo, M. B., Cintoni, M., Porcari, S., Rinninella, E., Kaitsas, F., Lener, E., Mele, M. C., Gasbarrini, A., Collado, M. C., Cammarota, G., & Ianiro, G. (2023). Short-Chain Fatty-Acid-Producing Bacteria: Key Components of the Human Gut Microbiota. Nutrients, 15(9), 2211. https://doi.org/10.3390/nu15092211
- Gerdin, L., González-Castro, A. M., Ericson, A. C., Persborn, M., Santos, J., Walter, S. A., Keita, Å. V., Vicario, M., & Söderholm, J. D. (2023). Acute psychological stress increases paracellular permeability and modulates immune activity in rectal mucosa of healthy volunteers. United European gastroenterology journal, 11(1), 31–41. https://doi.org/10.1002/ueg2.12329
- Ghaffarzadegan, T., Marungruang, N., Fåk, F., & Nyman, M. (2016). Molecular Properties of Guar Gum and Pectin Modify Cecal Bile Acids, Microbiota, and Plasma Lipopolysaccharide-Binding Protein in Rats. PloS one, 11(6), e0157427. https://doi.org/10.1371/journal.pone.0157427
- Gobbetti, T., Dalli, J., Colas, R. A., Federici Canova, D., Aursnes, M., Bonnet, D., Alric, L., Vergnolle, N., Deraison, C., Hansen, T. V., Serhan, C. N., & Perretti, M. (2017). Protectin D1n-3 DPA and resolvin D5n-3 DPA are effectors of intestinal protection. Proceedings of the National Academy of Sciences of the United States of America, 114(15), 3963–3968. https://doi.org/10.1073/pnas.1617290114
- Guo, P., Guo, Y., Zhu, Y., Yan, K., Fang, Y., Zhang, J., He, Y., Wei, Z., Xia, Y., & Dai, Y. (2026). Resolvin D5 Inhibits CXCL8 Expression in Colonic Epithelial Cells Through Activating GPR101 to Impede Neutrophil Recruitment and Consequently Alleviate Ulcerative Colitis. Advanced science (Weinheim, Baden-Wurttemberg, Germany), e15176. Advance online publication. https://doi.org/10.1002/advs.202515176
- Gupta, V. K., Kim, M., Bakshi, U., Cunningham, K. Y., Davis, J. M., 3rd, Lazaridis, K. N., Nelson, H., Chia, N., & Sung, J. (2020). A predictive index for health status using species-level gut microbiome profiling. Nature communications, 11(1), 4635. https://doi.org/10.1038/s41467-020-18476-8
- Hajihashemi, P., Haghighatdoost, F., Kassaian, N., Hoveida, L., Tamizifar, B., Nili, H., Rahim Khorasani, M., & Adibi, P. (2024). Bovine Colostrum in Increased Intestinal Permeability in Healthy Athletes and Patients: A Meta-Analysis of Randomized Clinical Trials. Digestive diseases and sciences, 69(4), 1345–1360. https://doi.org/10.1007/s10620-023-08219-2
- Heinz, S. A., Henson, D. A., Nieman, D. C., Austin, M. D., & Jin, F. (2010). A 12-week supplementation with quercetin does not affect natural killer cell activity, granulocyte oxidative burst activity or granulocyte phagocytosis in female human subjects. The British journal of nutrition, 104(6), 849–857. https://doi.org/10.1017/S000711451000156X
- Hong, P. Y., Croix, J. A., Greenberg, E., Gaskins, H. R., & Mackie, R. I. (2011). Pyrosequencing-based analysis of the mucosal microbiota in healthy individuals reveals ubiquitous bacterial groups and micro-heterogeneity. PloS one, 6(9), e25042. https://doi.org/10.1371/journal.pone.0025042
- Jandhyala, S. M., Talukdar, R., Subramanyam, C., Vuyyuru, H., Sasikala, M., & Nageshwar Reddy, D. (2015). Role of the normal gut microbiota. World journal of gastroenterology, 21(29), 8787–8803. https://doi.org/10.3748/wjg.v21.i29.8787
- Karłowicz, K., Lewandowski, K., Kaniewska, M. A., Głuszek-Osuch, M., Domżał-Magrowska, D., Talar-Wojnarowska, R., Skonieczna-Żydecka, K., Marlicz, W., Małecka-Wojciesko, E., & Rydzewska, G. (2025). Efficacy of Microencapsulated Sodium Butyrate as Add-On Therapy in Inducing Remission in Patients with Mild-To-Moderate Ulcerative Colitis: Results From a Multi-Center, Double-Blind, Randomized, Placebo-Controlled Study. Medical science monitor : international medical journal of experimental and clinical research, 31, e948912. https://doi.org/10.12659/MSM.948912
- Kirschner, S. K., Engelen, M. P., Haas, P., Bischoff, S. C., & Deutz, N. E. (2025). Short-chain fatty acid kinetics and concentrations are higher after inulin supplementation in young and older adults: a randomized trial. The American journal of clinical nutrition, 121(6), 1224–1235. https://doi.org/10.1016/j.ajcnut.2025.04.018
- Kong, J., Yang, J., He, C., Zhou, B., Fang, S., Salinas, M., Mohabbat, A. B., Bauer, B. A., & Wang, X. (2024). Regulation of endotoxemia through the gut microbiota: The role of the Mediterranean diet and its components. APMIS : acta pathologica, microbiologica, et immunologica Scandinavica, 132(12), 948–955. https://doi.org/10.1111/apm.13473
- Kumar Singh, A., Cabral, C., Kumar, R., Ganguly, R., Kumar Rana, H., Gupta, A., Rosaria Lauro, M., Carbone, C., Reis, F., & Pandey, A. K. (2019). Beneficial Effects of Dietary Polyphenols on Gut Microbiota and Strategies to Improve Delivery Efficiency. Nutrients, 11(9), 2216. https://doi.org/10.3390/nu11092216
- Kunovský, L., Dítě, P., Jabandžiev, P., & Švagera, Z. (2021).
Exocrine pancreatic insufficiency: A review of its causes, diagnosis, and management. Gastroenterology Research and Practice, 2021, 1–9. https://doi.org/10.1155/2021/6635883 - León, E. D., & Francino, M. P. (2022). Roles of Secretory Immunoglobulin A in Host-Microbiota Interactions in the Gut Ecosystem. Frontiers in microbiology, 13, 880484. https://doi.org/10.3389/fmicb.2022.880484
- Lin, R., Chen, H., Shu, W., Sun, M., Fang, L., Shi, Y., Pang, Z., Wu, W., & Liu, Z. (2018). Clinical significance of soluble immunoglobulins A and G and their coated bacteria in feces of patients with inflammatory bowel disease. Journal of translational medicine, 16(1), 359. https://doi.org/10.1186/s12967-018-1723-0
- Lin, S. H., Chou, L. M., Chien, Y. W., Chang, J. S., & Lin, C. I. (2016). Prebiotic Effects of Xylooligosaccharides on the Improvement of Microbiota Balance in Human Subjects. Gastroenterology research and practice, 2016, 5789232. https://doi.org/10.1155/2016/5789232
- Linninge, C., Jönsson, P., Bolinsson, H., Önning, G., Eriksson, J., Johansson, G., & Ahrné, S. (2018). Effects of acute stress provocation on cortisol levels, zonulin and inflammatory markers in low- and high-stressed men. Biological psychology, 138, 48–55. https://doi.org/10.1016/j.biopsycho.2018.08.013
- Lu, S. Y., Dan, L., Sun, S., Fu, T., & Chen, J. (2024). Dietary quercetin intake is associated with lower ulcerative colitis risk but not Crohn’s disease in a prospective cohort study and in vivo experiments. Food & function, 15(12), 6553–6564. https://doi.org/10.1039/d3fo05391a
- Maconi, G., Dominici, R., Molteni, P., Ardizzone, S., Bosani, M., Ferrara, E., Gallus, S., & Bianchi Porro, G. (2008).
Prevalence of pancreatic insufficiency in inflammatory bowel diseases. Assessment by fecal elastase-1. Digestive Diseases and Sciences, 53(1), 262–270. https://doi.org/10.1007/s10620-007-9834-9 - Mahmood, A., FitzGerald, A. J., Marchbank, T., Ntatsaki, E., Murray, D., Ghosh, S., & Playford, R. J. (2007). Zinc carnosine, a health food supplement that stabilises small bowel integrity and stimulates gut repair processes. Gut, 56(2), 168–175. https://doi.org/10.1136/gut.2006.099929
- Martel, J., Chang, S. H., Ko, Y. F., Hwang, T. L., Young, J. D., & Ojcius, D. M. (2022). Gut barrier disruption and chronic disease. Trends in endocrinology and metabolism: TEM, 33(4), 247–265. https://doi.org/10.1016/j.tem.2022.01.002
- Martoni, C. J., Srivastava, S., Damholt, A., & Leyer, G. J. (2023). Efficacy and dose response of Lactiplantibacillus plantarum in diarrhea-predominant irritable bowel syndrome. World journal of gastroenterology, 29(28), 4451–4465. https://doi.org/10.3748/wjg.v29.i28.4451
- Marwaha, K., Cain, R., Asmis, K., Czaplinski, K., Holland, N., Mayer, D. C. G., & Chacon, J. (2025). Exploring the complex relationship between psychosocial stress and the gut microbiome: implications for inflammation and immune modulation. Journal of applied physiology (Bethesda, Md. : 1985), 138(2), 518–535. https://doi.org/10.1152/japplphysiol.00652.2024
- Maslennikov, R., Gosteeva, E., Ananeva, V., Korshunova, L., Kravtsowa, A., Poluektova, E., Ulyanin, A., Sigidaev, A., Kikhasurova, P., & Ivashkin, V. (2026). Strain-Specific Systematic Review with Meta-Analysis of Probiotics Efficacy in the Treatment of Irritable Bowel Syndrome. Journal of clinical medicine, 15(3), 1152. https://doi.org/10.3390/jcm15031152
- Matsukura, T., & Tanaka, H. (2000). Applicability of zinc complex of L-carnosine for medical use. Biochemistry. Biokhimiia, 65(7), 817–823.
- McOrist, A. L., Miller, R., Bird, A. R., & Cummings, J. H. (2008).
A comparison of methods for the measurement of fecal short-chain fatty acids in healthy adults. Journal of Clinical Gastroenterology, 42(10), 1230–1235. https://doi.org/10.1097/MCG.0b013e318166e7b4 - Menni, C., Lin, C., Cecelja, M., Mangino, M., Matey-Hernandez, M. L., Keehn, L., Mohney, R. P., Steves, C. J., Spector, T. D., Kuo, C. F., Chowienczyk, P., & Valdes, A. M. (2018). Gut microbial diversity is associated with lower arterial stiffness in women. European heart journal, 39(25), 2390–2397. https://doi.org/10.1093/eurheartj/ehy226
- Neyrinck, A. M., Rodriguez, J., Zhang, Z., Seethaler, B., Sánchez, C. R., Roumain, M., Hiel, S., Bindels, L. B., Cani, P. D., Paquot, N., Cnop, M., Nazare, J. A., Laville, M., Muccioli, G. G., Bischoff, S. C., Walter, J., Thissen, J. P., & Delzenne, N. M. (2021). Prebiotic dietary fibre intervention improves fecal markers related to inflammation in obese patients: results from the Food4Gut randomized placebo-controlled trial. European journal of nutrition, 60(6), 3159–3170. https://doi.org/10.1007/s00394-021-02484-5
- Ogilvie, A. R., Onishi, J. C., Schlussel, Y., Kumar, A., Häggblom, M. M., Kerkhof, L. J., & Shapses, S. A. (2025). Short-term high fat diet-induced metabolic endotoxemia in older individuals with obesity: a randomized crossover study. The American journal of clinical nutrition, 122(2), 601–611. https://doi.org/10.1016/j.ajcnut.2025.06.001
- Patloka, O., Komprda, T., & Franke, G. (2024). Review of the Relationships Between Human Gut Microbiome, Diet, and Obesity. Nutrients, 16(23), 3996. https://doi.org/10.3390/nu16233996
- Pérez-Prieto, I., Plaza-Florido, A., Ubago-Guisado, E., Ortega, F. B., & Altmäe, S. (2024). Physical activity, sedentary behavior and microbiome: A systematic review and meta-analysis. Journal of science and medicine in sport, 27(11), 793–804. https://doi.org/10.1016/j.jsams.2024.07.003
- Physiology-Gastrointestinal and Liver Physiology, 321(1), G11–G17. https://doi.org/10.1152/ajpgi.00113.2021
- Pietrzak, B., Tomela, K., Olejnik-Schmidt, A., Mackiewicz, A., & Schmidt, M. (2020). Secretory IgA in Intestinal Mucosal Secretions as an Adaptive Barrier against Microbial Cells. International journal of molecular sciences, 21(23), 9254. https://doi.org/10.3390/ijms21239254
- Poon, T., Juana, J., Noori, D., Jeansen, S., Pierucci-Lagha, A., & Musa-Veloso, K. (2020). Effects of a Fermented Dairy Drink Containing Lacticaseibacillus paracasei subsp. paracasei CNCM I-1518 (Lactobacillus casei CNCM I-1518) and the Standard Yogurt Cultures on the Incidence, Duration, and Severity of Common Infectious Diseases: A Systematic Review and Meta-Analysis of Randomized Controlled Trials. Nutrients, 12(11), 3443. https://doi.org/10.3390/nu12113443
- Pugh, J. N., Sage, S., Hutson, M., Doran, D. A., Fleming, S. C., Highton, J., Morton, J. P., & Close, G. L. (2017). Glutamine supplementation reduces markers of intestinal permeability during running in the heat in a dose-dependent manner. European journal of applied physiology, 117(12), 2569–2577. https://doi.org/10.1007/s00421-017-3744-4
- Quiros, M., Feier, D., Birkl, D., Agarwal, R., Zhou, D. W., García, A. J., Parkos, C. A., & Nusrat, A. (2020). Resolvin E1 is a pro-repair molecule that promotes intestinal epithelial wound healing. Proceedings of the National Academy of Sciences of the United States of America, 117(17), 9477–9482. https://doi.org/10.1073/pnas.1921335117
- Reichardt, N., Duncan, S. H., Young, P., Belenguer, A., McWilliam Leitch, C., Scott, K. P., & Flint, H. J. (2018).
Phylogenetic distribution of three pathways for propionate production within the human gut microbiota. The ISME Journal, 12(6), 1461–1472. https://doi.org/10.1038/s41396-018-0082-0 - Reichardt, N., Vollmer, M., Holtrop, G., Farquharson, F. M., Wefers, D., Bunzel, M., Duncan, S. H., Drew, J. E., Williams, L. M., Milligan, G., Preston, T., Morrison, D., Flint, H. J., & Louis, P. (2018). Specific substrate-driven changes in human faecal microbiota composition contrast with functional redundancy in short-chain fatty acid production. The ISME journal, 12(2), 610–622. https://doi.org/10.1038/ismej.2017.196
- Reynolds, A., Mann, J., Cummings, J., Winter, N., Mete, E., & Te Morenga, L. (2019). Carbohydrate quality and human health: a series of systematic reviews and meta-analyses. Lancet (London, England), 393(10170), 434–445. https://doi.org/10.1016/S0140-6736(18)31809-9
- Sakai, S., Kamada, Y., Takano, H., Ichikawa, M., Kurimoto, M., Katsuyama, H. K., Nishihira, J., & Sasaki, M. (2022). Continuous partially hydrolyzed guar gum intake reduces cold-like symptoms: a randomized, placebo-controlled, double-blinded trial in healthy adults. European review for medical and pharmacological sciences, 26(14), 5154–5163. https://doi.org/10.26355/eurrev_202207_29304
- Salvatore, S., Heuschkel, R., Tomlin, S., Davies, S. E., Edwards, S., Walker-Smith, J. A., French, I., & Murch, S. H. (2000). A pilot study of N-acetyl glucosamine, a nutritional substrate for glycosaminoglycan synthesis, in paediatric chronic inflammatory bowel disease. Alimentary pharmacology & therapeutics, 14(12), 1567–1579. https://doi.org/10.1046/j.1365-2036.2000.00883.x
- Scalzo, P. L., Marshall, A. G., Soriano, S., Curry, K., Dulay, M., Hodics, T., Quigley, E. M. M., Treangen, T. J., Piskorz, M. M., & Villapol, S. (2025). Gut Microbiome dysbiosis and immune activation correlate with somatic and neuropsychiatric symptoms in COVID-19 patients. Journal of translational medicine, 23(1), 327. https://doi.org/10.1186/s12967-025-06348-y
- Scalzo, P. L., Marshall, A. G., Soriano, S., Curry, K., Dulay, M., Hodics, T., Quigley, E. M. M., Treangen, T. J., Piskorz, M. M., & Villapol, S. (2025). Gut Microbiome dysbiosis and immune activation correlate with somatic and neuropsychiatric symptoms in COVID-19 patients. Journal of translational medicine, 23(1), 327. https://doi.org/10.1186/s12967-025-06348-y
- Sędzikowska, A., & Szablewski, L. (2021). Human Gut Microbiota in Health and Selected Cancers. International journal of molecular sciences, 22(24), 13440. https://doi.org/10.3390/ijms222413440
- Seethaler, B., Nguyen, N. K., Basrai, M., Kiechle, M., Walter, J., Delzenne, N. M., & Bischoff, S. C. (2022). Short-chain fatty acids are key mediators of the favorable effects of the Mediterranean diet on intestinal barrier integrity: data from the randomized controlled LIBRE trial. The American journal of clinical nutrition, 116(4), 928–942. https://doi.org/10.1093/ajcn/nqac175
- Segata, N., Haake, S. K., Mannon, P., Lemon, K. P., Waldron, L., Gevers, D., Huttenhower, C., & Izard, J. (2012). Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples. Genome biology, 13(6), R42. https://doi.org/10.1186/gb-2012-13-6-r42
- Sharma, H. (2015). Meditation: Process and effects. AYU (An International Quarterly Journal of Research in Ayurveda), 36(3), 233–237. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4895748/
- Shin, N. R., Whon, T. W., & Bae, J. W. (2015). Proteobacteria: microbial signature of dysbiosis in gut microbiota. Trends in biotechnology, 33(9), 496–503. https://doi.org/10.1016/j.tibtech.2015.06.011
- Simpson, H. L., & Campbell, B. J. (2015). Review article: dietary fibre-microbiota interactions. Alimentary pharmacology & therapeutics, 42(2), 158–179. https://doi.org/10.1111/apt.13248
- Singh, R. K., Chang, H. W., Yan, D., Lee, K. M., Ucmak, D., Wong, K., … Liao, W. (2017). Influence of diet on the gut microbiome and implications for human health. Journal of Translational Medicine, 15(1), 73. https://doi.org/10.1186/s12967-017-1175-y
- Souza, P. R., Marques, R. M., Gomez, E. A., Colas, R. A., De Matteis, R., Zak, A., Patel, M., Collier, D. J., & Dalli, J. (2020). Enriched Marine Oil Supplements Increase Peripheral Blood Specialized Pro-Resolving Mediators Concentrations and Reprogram Host Immune Responses: A Randomized Double-Blind Placebo-Controlled Study. Circulation research, 126(1), 75–90. https://doi.org/10.1161/CIRCRESAHA.119.315506
- Tandon, D., Haque, M. M., Gote, M., Jain, M., Bhaduri, A., Dubey, A. K., & Mande, S. S. (2019). A prospective randomized, double-blind, placebo-controlled, dose-response relationship study to investigate efficacy of fructo-oligosaccharides (FOS) on human gut microflora. Scientific reports, 9(1), 5473. https://doi.org/10.1038/s41598-019-41837-3
- Tejedor Vaquero, S., Neuman, H., Comerma, L., Marcos-Fa, X., Corral-Vazquez, C., Uzzan, M., Pybus, M., Segura-Garzón, D., Guerra, J., Perruzza, L., Tachó-Piñot, R., Sintes, J., Rosenstein, A., Grasset, E. K., Iglesias, M., Gonzalez Farré, M., Lop, J., Patriaca-Amiano, M. E., Larrubia-Loring, M., Santiago-Diaz, P., … Magri, G. (2024). Immunomolecular and reactivity landscapes of gut IgA subclasses in homeostasis and inflammatory bowel disease. The Journal of experimental medicine, 221(12), e20230079. https://doi.org/10.1084/jem.20230079
- The Department of Health & Human Services. (2019, February 1). Physical activity guidelines for Americans. Retrieved from https://www.hhs.gov/fitness/be-active/physical-activity-guidelines-for-americans/index.html
- Vanga, R. R., Tansel, A., Sidiq, S., El-Serag, H. B., & Othman, M. O. (2018).
Diagnostic performance of measurement of fecal elastase-1 in detection of exocrine pancreatic insufficiency: Systematic review and meta-analysis. Clinical Gastroenterology and Hepatology, 16(8), 1220–1228.e4. https://doi.org/10.1016/j.cgh.2018.01.027 - Vanuytsel, T., van Wanrooy, S., Vanheel, H., Vanormelingen, C., Verschueren, S., Houben, E., Salim Rasoel, S., Tόth, J., Holvoet, L., Farré, R., Van Oudenhove, L., Boeckxstaens, G., Verbeke, K., & Tack, J. (2014). Psychological stress and corticotropin-releasing hormone increase intestinal permeability in humans by a mast cell-dependent mechanism. Gut, 63(8), 1293–1299. https://doi.org/10.1136/gutjnl-2013-305690
- Vernero, M., De Blasio, F., Ribaldone, D. G., Bugianesi, E., Pellicano, R., Saracco, G. M., Astegiano, M., & Caviglia, G. P. (2020). The Usefulness of Microencapsulated Sodium Butyrate Add-On Therapy in Maintaining Remission in Patients with Ulcerative Colitis: A Prospective Observational Study. Journal of clinical medicine, 9(12), 3941. https://doi.org/10.3390/jcm9123941
- Veronese, N., Gianfredi, V., Solmi, M., Barbagallo, M., Dominguez, L. J., Mandalà, C., Di Palermo, C., Carruba, L., Solimando, L., Stubbs, B., Castagna, A., Maggi, S., Zanetti, M., Al-Daghri, N., Sabico, S., Nucci, D., Gosling, C., & Fontana, L. (2025). The impact of dietary fiber consumption on human health: An umbrella review of evidence from 17,155,277 individuals. Clinical nutrition (Edinburgh, Scotland), 51, 325–333. https://doi.org/10.1016/j.clnu.2025.06.021
- Villar-García, J., Güerri-Fernández, R., Moya, A., González, A., Hernández, J. J., Lerma, E., Guelar, A., Sorli, L., Horcajada, J. P., Artacho, A., D Auria, G., & Knobel, H. (2017). Impact of probiotic Saccharomyces boulardii on the gut microbiome composition in HIV-treated patients: A double-blind, randomised, placebo-controlled trial. PloS one, 12(4), e0173802. https://doi.org/10.1371/journal.pone.0173802
- Volynets, V., Louis, S., Pretz, D., Lang, L., Ostaff, M. J., Wehkamp, J., & Bischoff, S. C. (2017). Intestinal Barrier Function and the Gut Microbiome Are Differentially Affected in Mice Fed a Western-Style Diet or Drinking Water Supplemented with Fructose. The Journal of nutrition, 147(5), 770–780. https://doi.org/10.3945/jn.116.242859
- Vulevic, J., Juric, A., Tzortzis, G., & Gibson, G. R. (2013). A mixture of trans-galactooligosaccharides reduces markers of metabolic syndrome and modulates the fecal microbiota and immune function of overweight adults. The Journal of nutrition, 143(3), 324–331. https://doi.org/10.3945/jn.112.166132
- Walsham, N. E., & Sherwood, R. A. (2016). Fecal calprotectin in inflammatory bowel disease. Clinical and experimental gastroenterology, 9, 21–29. https://doi.org/10.2147/CEG.S51902
- Wang, T., Lu, S. Y., Dan, L., Sun, Y., Fu, T., Tian, L., & Chen, J. (2024). Higher Dietary Quercetin Intake Is Associated with Lower Risk of Adverse Outcomes among Individuals with Inflammatory Bowel Disease in a Prospective Cohort Study. The Journal of nutrition, 154(6), 1861–1868. https://doi.org/10.1016/j.tjnut.2024.04.025
- Watanabe, C., Hirai, H., Aoki, T., Kataoka, H., Iseki, M., Hamada, H., Kawashima, M., Kremenik, M. J., Yano, H., & Oyanagi, E. (2026). Partially hydrolyzed guar gum intake alleviates lipopolysaccharide-induced systemic inflammation via gut microbial alteration in mice. Nutrition (Burbank, Los Angeles County, Calif.), 142, 113009. https://doi.org/10.1016/j.nut.2025.113009
- Whitcomb, D. C. (2023).
Genetic risk factors for pancreatic disorders. Gastroenterology, 164(4), 844–857. https://doi.org/10.1053/j.gastro.2022.12.033 - Yang, Q., Liang, Q., Balakrishnan, B., Belobrajdic, D. P., Feng, Q. J., & Zhang, W. (2020). Role of Dietary Nutrients in the Modulation of Gut Microbiota: A Narrative Review. Nutrients, 12(2), 381. https://doi.org/10.3390/nu12020381
- Zhang, Y., Belkassem, N., Umanets, A., de Santana-Filho, A. P., Venema, K., Schols, H. A., Penders, J., Jonkers, D., & Abboud, K. Y. (2025). A head-to-head comparison of soluble dietary fibers on microbiota composition and short-chain fatty acid production using the in vitro TIM-2 system. Carbohydrate polymers, 368(Pt 1), 124090. https://doi.org/10.1016/j.carbpol.2025.124090
- Zheng, Y., Zhang, Z., Tang, P., Wu, Y., Zhang, A., Li, D., Wang, C. Z., Wan, J. Y., Yao, H., & Yuan, C. S. (2023). Probiotics fortify intestinal barrier function: a systematic review and meta-analysis of randomized trials. Frontiers in immunology, 14, 1143548. https://doi.org/10.3389/fimmu.2023.1143548
- Zhou, Q., Verne, M. L., Fields, J. Z., Lefante, J. J., Basra, S., Salameh, H., & Verne, G. N. (2019). Randomised placebo-controlled trial of dietary glutamine supplements for postinfectious irritable bowel syndrome. Gut, 68(6), 996–1002. https://doi.org/10.1136/gutjnl-2017-315136
- Zhou, Z., Zhuang, Z., Ding, Y., Jiang, Y., Chen, S., Zhang, Q., Que, H., Lin, J., Deng, H., & Wang, Y. (2026). Oral microbiome diversity and all-cause mortality in hypertensive adults: findings from a nationally representative cohort. Journal of oral microbiology, 18(1), 2609456. https://doi.org/10.1080/20002297.2025.2609456
- Zuhl, M. N., Lanphere, K. R., Kravitz, L., Mermier, C. M., Schneider, S., Dokladny, K., & Moseley, P. L. (2014). Effects of oral glutamine supplementation on exercise-induced gastrointestinal permeability and tight junction protein expression. Journal of applied physiology (Bethesda, Md. : 1985), 116(2), 183–191. https://doi.org/10.1152/japplphysiol.00646.2013